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Felix Hoffstaedter 41f00d1ae8 [DATALAD RUNCMD] Compute sub-0001 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        mkdir -p {outputs[0]} || true         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "4a22f797-1055-4665-b823-0fd319001cc6",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/AOMIC_ID1000/sub-0001/anat/sub-0001_run-2_T1w.nii.gz"
 ],
 "outputs": [
  "sub-0001"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2024-08-26 12:47:03 +02:00
..
catROI_sub-0001_run-1_T1w.mat [DATALAD RUNCMD] Compute sub-0001 2024-08-26 09:29:07 +02:00
catROI_sub-0001_run-1_T1w.xml [DATALAD RUNCMD] Compute sub-0001 2024-08-26 09:29:07 +02:00
catROI_sub-0001_run-2_T1w.mat [DATALAD RUNCMD] Compute sub-0001 2024-08-26 12:47:03 +02:00
catROI_sub-0001_run-2_T1w.xml [DATALAD RUNCMD] Compute sub-0001 2024-08-26 12:47:03 +02:00
catROI_sub-0001_run-3_T1w.mat [DATALAD RUNCMD] Compute sub-0001 2024-08-26 11:00:26 +02:00
catROI_sub-0001_run-3_T1w.xml [DATALAD RUNCMD] Compute sub-0001 2024-08-26 11:00:26 +02:00
catROIs_sub-0001_run-1_T1w.mat [DATALAD RUNCMD] Compute sub-0001 2024-08-26 12:47:03 +02:00
catROIs_sub-0001_run-1_T1w.xml [DATALAD RUNCMD] Compute sub-0001 2024-08-26 09:29:07 +02:00
catROIs_sub-0001_run-2_T1w.mat [DATALAD RUNCMD] Compute sub-0001 2024-08-26 12:47:03 +02:00
catROIs_sub-0001_run-2_T1w.xml [DATALAD RUNCMD] Compute sub-0001 2024-08-26 12:47:03 +02:00
catROIs_sub-0001_run-3_T1w.mat [DATALAD RUNCMD] Compute sub-0001 2024-08-26 12:47:03 +02:00
catROIs_sub-0001_run-3_T1w.xml [DATALAD RUNCMD] Compute sub-0001 2024-08-26 11:00:26 +02:00